| Ecosystem | Type | Status | Ref. |
|---|---|---|---|
| Agulhas Current | Sea/Bay/Gulf | native | 510 |
| Andaman Sea | Sea/Bay/Gulf | native | 510 |
| Bay of Bengal | Sea/Bay/Gulf | native | 510 |
| Calamianes Islands | Sea/Bay/Gulf | native | 48613 |
| Coral Sea and GBR | Sea/Bay/Gulf | native | 510 |
| Davao Gulf | Sea/Bay/Gulf | native | 106380 |
| East Central Australian Shelf | Sea/Bay/Gulf | native | 510 |
| Erhjen River | River (basin) | native | 36073 |
| Great Barrier Reef | Sea/Bay/Gulf | native | 7247 |
| Hsiao-liu-chiu | Sea/Bay/Gulf | native | 48445 |
| Indian Ocean | Sea/Bay/Gulf | native | 7247 |
| Indonesian Sea | Sea/Bay/Gulf | native | 510 |
| Insular Pacific-Hawaiian | Sea/Bay/Gulf | native | 510 |
| Kermadec Island | Sea/Bay/Gulf | native | 106682 |
| Kimbe Bay | Sea/Bay/Gulf | native | 28888 |
| Kuroshio Current | Sea/Bay/Gulf | native | 559 |
| Lutao Island | Sea/Bay/Gulf | native | 11104 |
| Milne Bay | Sea/Bay/Gulf | native | 41464 |
| New Zealand Shelf | Sea/Bay/Gulf | native | 5755 |
| North Australian Shelf | Sea/Bay/Gulf | native | 510 |
| Northeast Australian Shelf | Sea/Bay/Gulf | native | 510 |
| Northwest Australian Shelf | Sea/Bay/Gulf | native | 510 |
| Pacific Ocean | Sea/Bay/Gulf | native | 592 |
| Peng-hu Island | Sea/Bay/Gulf | native | 55073 |
| Polynesian Waters | Sea/Bay/Gulf | native | 510 |
| Rapa-Pitcairn | Sea/Bay/Gulf | native | 121505 |
| Somali Coastal Current | Sea/Bay/Gulf | native | 510 |
| South China Sea | Sea/Bay/Gulf | native | 36648 |
| Southern China | Sea/Bay/Gulf | native | 31075 |
| Spratly Islands | Sea/Bay/Gulf | native | 48445 |
| Sulu-Celebes Sea | Sea/Bay/Gulf | native | 45419 |
| Tasman Sea | Sea/Bay/Gulf | native | 510 |
| Wan-li-tung | Sea/Bay/Gulf | native | 43514 |
| Yellow Sea | Sea/Bay/Gulf | native | 510 |