| Ecosystem | Type | Status | Ref. |
|---|---|---|---|
| Andaman Sea | Sea/Bay/Gulf | native | 2109 |
| Arabian Sea | Sea/Bay/Gulf | native | 2872 |
| Bay of Bengal | Sea/Bay/Gulf | native | 2109 |
| Chilika Lake/Lagoon | Lagoon | native | 29108 |
| East China Sea | Sea/Bay/Gulf | native | 47843 |
| Godavari | River (basin) | native | 51036 |
| Gulf of Aden | Sea/Bay/Gulf | native | |
| Gulf of Thailand | Sea/Bay/Gulf | native | 2109 |
| Indian Ocean | Sea/Bay/Gulf | native | 3468 |
| Indonesian Sea | Sea/Bay/Gulf | native | 7050 |
| North Australian Shelf | Sea/Bay/Gulf | native | 3468 |
| Northeast Australian Shelf | Sea/Bay/Gulf | native | 3468 |
| Oriental | Zoogeographic realm | endemic | 7050 |
| Pacific Ocean | Sea/Bay/Gulf | native | 3468 |
| Persian Gulf | Sea/Bay/Gulf | native | 68964 |
| Red Sea | Sea/Bay/Gulf | native | 84159 |
| South China Sea | Sea/Bay/Gulf | native | 2682 |
| Southern China | Sea/Bay/Gulf | native | 31075 |
| Sulu-Celebes Sea | Sea/Bay/Gulf | native | 3468 |