| Ecosystem | Type | Status | Ref. |
|---|---|---|---|
| Davao Gulf | Sea/Bay/Gulf | native | 43437 |
| Indonesian Sea | Sea/Bay/Gulf | native | 7247 |
| Kimbe Bay | Sea/Bay/Gulf | native | 28888 |
| Milne Bay | Sea/Bay/Gulf | native | 41464 |
| Northeast Australian Shelf | Sea/Bay/Gulf | native | 1602 |
| Pacific Ocean | Sea/Bay/Gulf | native | 1602 |
| Tañon Strait | Sea/Bay/Gulf | native | 107276 |
| Tubbataha Reefs | Sea/Bay/Gulf | native | 53416 |