| Ecosystem | Type | Status | Ref. |
|---|---|---|---|
| Great Barrier Reef | Sea/Bay/Gulf | native | 75154 |
| Indonesian Sea | Sea/Bay/Gulf | native | 3810 |
| Northeast Australian Shelf | Sea/Bay/Gulf | native | 3810 |
| Pacific Ocean | Sea/Bay/Gulf | native | 3810 |
| Sogod Bay | Sea/Bay/Gulf | native | 46392 |
| South China Sea | Sea/Bay/Gulf | native | 3810 |
| Southern Palawan | Sea/Bay/Gulf | native | 114805 |
| Sulu-Celebes Sea | Sea/Bay/Gulf | native | 10558 |
| Visayan Sea | Sea/Bay/Gulf | native | 3557 |