| Ecosystem | Type | Status | Ref. |
|---|---|---|---|
| Agulhas Current | Sea/Bay/Gulf | native | 5285 |
| Arabian Sea | Sea/Bay/Gulf | native | 129713 |
| Atlantic Ocean | Sea/Bay/Gulf | native | 9806 |
| Coral Sea and GBR | Sea/Bay/Gulf | native | 4690 |
| Dauin-Apo I. | Sea/Bay/Gulf | native | 127519 |
| East China Sea | Sea/Bay/Gulf | native | 9710 |
| Great Barrier Reef | Sea/Bay/Gulf | native | 48497 |
| Gulf of Oman | Sea/Bay/Gulf | native | 27549 |
| Indian Ocean | Sea/Bay/Gulf | native | 9806 |
| Indonesian Sea | Sea/Bay/Gulf | native | 5978 |
| Kuroshio Current | Sea/Bay/Gulf | native | 559 |
| Lingayen Gulf | Sea/Bay/Gulf | native | 5399 |
| Milne Bay | Sea/Bay/Gulf | native | 41464 |
| North Australian Shelf | Sea/Bay/Gulf | native | 4690 |
| Northeast Australian Shelf | Sea/Bay/Gulf | native | 4690 |
| Northwest Australian Shelf | Sea/Bay/Gulf | native | 4690 |
| Pacific Ocean | Sea/Bay/Gulf | native | 592 |
| Peng-hu Island | Sea/Bay/Gulf | native | 55073 |
| Polynesian Waters | Sea/Bay/Gulf | native | 9806 |
| Red Sea | Sea/Bay/Gulf | native | 84159 |
| San Pedro Bay | Sea/Bay/Gulf | native | 46240 |
| Sea of Japan/East Sea | Sea/Bay/Gulf | native | 559 |
| Somali Coastal Current | Sea/Bay/Gulf | native | 12484 |
| Sorsogon Bay | Sea/Bay/Gulf | native | 47531 |
| South China Sea | Sea/Bay/Gulf | native | 36648 |
| Southern China | Sea/Bay/Gulf | native | 119494 |
| Sulu-Celebes Sea | Sea/Bay/Gulf | native | 4848 |
| Tahiti I. | Sea/Bay/Gulf | native | 89972 |
| Tawi tawi Bay | Sea/Bay/Gulf | native | 59110 |
| Tayabas Bay | Sea/Bay/Gulf | native | 47573 |
| Yellow Sea | Sea/Bay/Gulf | native | 4868 |