| Ecosystem | Type | Status | Ref. |
|---|---|---|---|
| Agulhas Current | Sea/Bay/Gulf | native | 5222 |
| Coral Sea and GBR | Sea/Bay/Gulf | native | 5222 |
| Great Barrier Reef | Sea/Bay/Gulf | native | 5222 |
| Gulf of Aden | Sea/Bay/Gulf | native | 33390 |
| Gulf of Oman | Sea/Bay/Gulf | native | 33390 |
| Indian Ocean | Sea/Bay/Gulf | native | 5222 |
| Indonesian Sea | Sea/Bay/Gulf | native | 4787 |
| Kimbe Bay | Sea/Bay/Gulf | native | 28888 |
| Kuroshio Current | Sea/Bay/Gulf | native | 5222 |
| Lanuza Bay | Sea/Bay/Gulf | native | 104756 |
| Milne Bay | Sea/Bay/Gulf | native | 41464 |
| North Australian Shelf | Sea/Bay/Gulf | native | 5222 |
| Northwest Australian Shelf | Sea/Bay/Gulf | native | 5222 |
| Pacific Ocean | Sea/Bay/Gulf | native | 4787 |
| Polynesian Waters | Sea/Bay/Gulf | native | 4787 |
| Rapa-Pitcairn | Sea/Bay/Gulf | native | 121505 |
| South China Sea | Sea/Bay/Gulf | native | 36648 |
| Tahiti I. | Sea/Bay/Gulf | native | 4787 |
| Tubbataha Reefs | Sea/Bay/Gulf | native | 53416 |
| Yellow Sea | Sea/Bay/Gulf | native | 4868 |